STRINGSTRING
Noca_3124 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3124" - NLP/P60 protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3124NLP/P60 protein (327 aa)    
Predicted Functional Partners:
Noca_3123
Hypothetical protein (424 aa)
              0.841
Noca_3122
Peptidase M48, Ste24p (411 aa)
              0.828
Noca_4160
Cell wall hydrolase/autolysin (259 aa)
       
  0.526
Noca_1785
Major facilitator transporter (493 aa)
       
      0.517
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation (446 aa)
       
  0.507
Noca_2794
Membrane-bound lytic murein transglycosylase B-like protein (466 aa)
       
    0.488
Noca_0922
Membrane-bound lytic murein transglycosylase B-like protein (249 aa)
       
    0.488
Noca_0498
Secreted protein (389 aa)
       
    0.488
Noca_4513
Glycoside hydrolase family 3 protein (388 aa)
         
  0.448
Noca_4486
Glycoside hydrolase family protein (468 aa)
         
  0.448
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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