STRINGSTRING
Noca_3125 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3125" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3125Hypothetical protein (77 aa)    
Predicted Functional Partners:
Noca_3128
Hypothetical protein (601 aa)
 
          0.704
Noca_3126
Hypothetical protein (425 aa)
              0.681
Noca_3127
Hypothetical protein (88 aa)
              0.667
Noca_1202
Hypothetical protein (100 aa)
   
          0.665
Noca_1280
HNH nuclease (414 aa)
   
          0.636
Noca_0927
Hypothetical protein (341 aa)
   
          0.626
Noca_1463
HNH nuclease (414 aa)
   
          0.609
Noca_1741
HNH nuclease (414 aa)
   
          0.608
Noca_4566
Abortive infection protein (233 aa)
   
          0.582
Noca_1800
Hypothetical protein (170 aa)
   
          0.563
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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