STRINGSTRING
Noca_3129 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3129" - AsnC family transcriptional regulator in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3129AsnC family transcriptional regulator (92 aa)    
Predicted Functional Partners:
Noca_3128
Hypothetical protein (601 aa)
   
        0.884
Noca_3130
Hypothetical protein (208 aa)
              0.850
Noca_2600
uroporphyrinogen-III C-methyltransferase (407 aa)
   
   
  0.681
Noca_4381
Radical SAM domain-containing protein (381 aa)
   
 
  0.656
Noca_1430
Radical SAM domain-containing protein (389 aa)
   
 
  0.656
Noca_4529
Anthranilate synthase component I/chorismate-binding protein (666 aa)
       
  0.629
Noca_0496
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase (552 aa)
   
   
  0.625
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
   
   
  0.616
Noca_3127
Hypothetical protein (88 aa)
              0.613
Noca_3126
Hypothetical protein (425 aa)
              0.577
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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