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Noca_3138 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3138" - ErfK/YbiS/YcfS/YnhG family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3138ErfK/YbiS/YcfS/YnhG family protein (402 aa)    
Predicted Functional Partners:
Noca_3139
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown (132 aa)
 
          0.834
Noca_0254
Amino acid-binding ACT domain-containing protein (207 aa)
   
        0.751
Noca_3444
Methionine synthase, vitamin-B12 independent (338 aa)
   
          0.749
Noca_4675
Integral membrane protein (496 aa)
   
          0.744
Noca_1994
Hypothetical protein (147 aa)
   
          0.733
Noca_2298
Hypothetical protein (238 aa)
   
          0.674
Noca_0343
Peptidase S1 and S6, chymotrypsin/Hap (391 aa)
 
 
      0.664
Noca_4689
N-acetyltransferase GCN5 (224 aa)
   
          0.658
Noca_3141
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (324 aa)
              0.641
Noca_0474
Hypothetical protein (256 aa)
   
          0.634
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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