STRINGSTRING
Noca_3152 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3152" - PspA/IM30 family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3152PspA/IM30 family protein (260 aa)    
Predicted Functional Partners:
Noca_3150
Hypothetical protein (192 aa)
 
          0.949
Noca_3608
PspC domain-containing protein (419 aa)
   
 
  0.882
htpX
Heat shock protein HtpX (309 aa)
 
        0.848
Noca_3153
Integral membrane protein (194 aa)
 
     
  0.786
Noca_1787
Hypothetical protein (255 aa)
   
          0.747
Noca_3132
Hypothetical protein (139 aa)
   
 
      0.491
Noca_4520
ATPase domain-containing protein (471 aa)
   
      0.488
Noca_3469
Hypothetical protein (126 aa)
   
          0.475
Noca_1794
Hypothetical protein (446 aa)
   
          0.474
Noca_2958
DNA topoisomerase IV subunit B (710 aa)
   
     
  0.471
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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