STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3182Transcriptional regulator, DeoR family; PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: nfa:nfa28560 putative transcriptional regulator. (255 aa)    
Predicted Functional Partners:
Noca_3184
Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: mmc:Mmcs_0080 phosphotransferase system, fructose IIC component; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.
 
  
 0.995
Noca_3183
PFAM: PfkB domain protein; KEGG: nfa:nfa28550 putative fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.988
Noca_3181
Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
  
 0.838
Noca_3185
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: mmc:Mmcs_0079 phosphotransferase system, HPr.
 
  
 0.807
Noca_2948
CoA-binding domain protein; PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: tfu:Tfu_2128 hypothetical protein.
   
   0.572
Noca_3164
Mannitol PTS system EIICBA or EIICB component; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: ppr:PBPRB0363 putative mannitol-specific IIABC component, PTS system; TC 4.A.2.1.2; TC 4.A.2.1.2; TC 4.A.2.1.2.
 
   
 0.495
Noca_0401
Short-chain dehydrogenase/reductase SDR; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KEGG: syn:slr1208 short-chain alcohol dehydrogenase family.
  
  
 0.479
Noca_3637
PFAM: FAD dependent oxidoreductase; KEGG: tfu:Tfu_2593 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.476
Noca_3483
Ribose 5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; KEGG: sma:SAV5426 putative ribose-5-phosphate isomerase.
  
  
 0.465
Noca_4592
PFAM: FAD dependent oxidoreductase; KEGG: sco:SCO0670 glycerol-3-phosphate dehydrogenase.
 
  
 0.441
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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