STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3208KEGG: mmc:Mmcs_2752 hypothetical protein. (79 aa)    
Predicted Functional Partners:
Noca_4152
KEGG: mpa:MAP2481c hypothetical protein.
  
     0.617
Noca_1976
KEGG: mmc:Mmcs_3634 hypothetical protein.
  
     0.596
Noca_2374
KEGG: rha:RHA1_ro07061 hypothetical protein.
  
     0.545
Noca_3720
KEGG: nfa:nfa29830 hypothetical protein.
  
     0.526
Noca_2818
KEGG: sma:SAV5893 hypothetical protein.
  
     0.518
Noca_3954
PFAM: nuclear transport factor 2; KEGG: rha:RHA1_ro03609 steroid delta-isomerase.
 
     0.510
Noca_3635
KEGG: mbo:Mb3194 hypothetical protein.
  
     0.502
Noca_0011
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_2727 regulatory protein GntR, HTH.
  
     0.465
Noca_4553
PFAM: cyclase/dehydrase; Activator of Hsp90 ATPase 1 family protein; KEGG: mpa:MAP1606c hypothetical protein.
  
     0.436
Noca_0010
PFAM: fatty acid hydroxylase; KEGG: mmc:Mmcs_2728 fatty acid hydroxylase.
  
     0.405
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.