STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3219PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mpa:MAP1053 hypothetical protein. (427 aa)    
Predicted Functional Partners:
Noca_3220
Hypothetical protein; KEGG: nfa:nfa40670 putative translation initiation factor IF-2.
       0.773
Noca_1463
SMART: HNH nuclease; KEGG: fal:FRAAL3997 hypothetical protein.
  
     0.664
Noca_1741
SMART: HNH nuclease; KEGG: fal:FRAAL3997 hypothetical protein.
  
     0.657
Noca_1280
SMART: HNH nuclease; KEGG: fal:FRAAL3997 hypothetical protein.
  
     0.625
Noca_2809
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: fal:FRAAL3997 hypothetical protein.
  
     0.624
Noca_3102
KEGG: nfa:nfa6330 hypothetical protein.
  
    0.536
Noca_2384
KEGG: rha:RHA1_ro05202 hypothetical protein.
 
     0.485
Noca_2964
PFAM: HhH-GPD family protein; KEGG: mbo:Mb1187 hypothetical protein.
  
     0.484
Noca_0782
KEGG: sme:SMa0044 hypothetical protein.
  
     0.452
Noca_3520
KEGG: rha:RHA1_ro05202 hypothetical protein.
 
     0.447
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.