STRINGSTRING
Noca_3221 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3221" - Saccharopine dehydrogenase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3221Saccharopine dehydrogenase (407 aa)    
Predicted Functional Partners:
Noca_3222
Aldehyde dehydrogenase (477 aa)
   
 
  0.816
Noca_3224
Agmatinase (333 aa)
 
     
  0.724
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (466 aa)
   
 
  0.706
Noca_4523
Aminotransferase (413 aa)
   
  0.691
argD
Acetylornithine aminotransferase (411 aa)
   
  0.691
Noca_4627
Hypothetical protein (435 aa)
   
 
  0.612
Noca_3205
4-aminobutyrate aminotransferase (450 aa)
   
 
  0.612
Noca_0645
4-aminobutyrate aminotransferase (452 aa)
   
 
  0.612
Noca_3362
Orn/Lys/Arg decarboxylase, major region (473 aa)
 
     
  0.604
Noca_4626
Methylmalonate-semialdehyde dehydrogenase (498 aa)
   
 
  0.602
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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