Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Noca_3231PFAM: FAD dependent oxidoreductase; KEGG: fal:FRAAL6023 hypothetical protein; putative signal peptide. (466 aa)    
Predicted Functional Partners:
Noca_3230
PFAM: regulatory protein, AsnC/Lrp family; KEGG: fra:Francci3_3779 transcriptional regulator, AsnC family.
 
    0.896
Noca_3229
PFAM: extracellular solute-binding protein, family 1; KEGG: sma:SAV2591 putative ABC-transporter polyamine-binding lipoprotein.
 
   
 0.833
Noca_3227
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2589 putative polyamine ABC-transporter permease protein.
 
    0.749
Noca_3226
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2588 putative polyamine ABC-transporter integral membrane protein.
 
     0.723
Noca_3225
PFAM: aminotransferase class-III; KEGG: sma:SAV2612 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.704
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.677
Noca_4627
PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_0347 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.531
Noca_3836
PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV5711 hydrolase.
  
 
  0.413
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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