STRINGSTRING
Noca_3233 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3233" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3233Hypothetical protein (240 aa)    
Predicted Functional Partners:
Noca_3234
Hypothetical protein (361 aa)
              0.796
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (527 aa)
   
        0.572
Noca_2989
30S ribosomal protein S1 (490 aa)
     
 
    0.570
Noca_2638
tRNA (adenine-58-N(1)-) methyltransferase (316 aa)
     
        0.568
Noca_3692
ATP-dependent helicase HrpA (1282 aa)
     
    0.547
Noca_4669
Hypothetical protein (811 aa)
   
          0.537
Noca_4463
Major facilitator transporter (449 aa)
   
          0.533
rpsE
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy (205 aa)
     
    0.518
rpsO
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (91 aa)
     
 
    0.514
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (202 aa)
     
 
    0.503
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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