STRINGSTRING
Noca_3235 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3235" - Metallophosphoesterase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3235Metallophosphoesterase (499 aa)    
Predicted Functional Partners:
Noca_3234
Hypothetical protein (361 aa)
 
          0.675
Noca_3525
Hypothetical protein (148 aa)
   
          0.567
Noca_3849
Phosphotransferase domain-containing protein (497 aa)
   
          0.561
Noca_1529
Hypothetical protein (202 aa)
   
          0.538
Noca_3233
Hypothetical protein (240 aa)
              0.484
Noca_0391
Limonene-1,2-epoxide hydrolase (134 aa)
   
          0.467
Noca_2884
Hypothetical protein (226 aa)
   
          0.449
Noca_2812
Pyridoxamine 5’-phosphate oxidase-like protein (165 aa)
   
          0.440
Noca_2411
Peptidase A24A, prepilin type IV (242 aa)
   
          0.434
Noca_2783
Hypothetical protein (170 aa)
   
          0.429
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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