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Noca_3258 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3258" - N-acetyltransferase GCN5 in Nocardioides sp. JS614
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3258N-acetyltransferase GCN5 (226 aa)    
Predicted Functional Partners:
trmD
tRNA (Guanine37-N1) methyltransferase; Specifically methylates guanosine-37 in various tRNAs (385 aa)
              0.866
rimM
16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (184 aa)
   
        0.862
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (116 aa)
       
    0.662
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (202 aa)
   
      0.642
Noca_4220
DegT/DnrJ/EryC1/StrS aminotransferase (369 aa)
   
 
  0.627
Noca_4210
DegT/DnrJ/EryC1/StrS aminotransferase (362 aa)
   
 
  0.627
Noca_1028
DegT/DnrJ/EryC1/StrS aminotransferase (269 aa)
   
 
  0.627
Noca_3260
30S ribosomal protein S16 (465 aa)
              0.588
Noca_3259
Hypothetical protein (80 aa)
              0.575
Noca_4184
Polysaccharide biosynthesis protein CapD (610 aa)
         
  0.468
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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