STRINGSTRING
Noca_3259 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3259" - Hypothetical protein in Nocardioides sp. JS614
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3259Hypothetical protein (80 aa)    
Predicted Functional Partners:
Noca_4696
Single-stranded nucleic acid binding R3H domain-containing protein (192 aa)
   
      0.896
Noca_3260
30S ribosomal protein S16 (465 aa)
   
   
  0.882
trmD
tRNA (Guanine37-N1) methyltransferase; Specifically methylates guanosine-37 in various tRNAs (385 aa)
   
        0.747
rimM
16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (184 aa)
   
        0.731
Noca_3282
Hypothetical protein (192 aa)
 
          0.655
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (116 aa)
   
        0.642
Noca_3452
Ribonuclease G (1070 aa)
       
      0.630
Noca_3254
Signal peptidase I (267 aa)
 
          0.627
Noca_3252
Hypothetical protein (102 aa)
 
          0.609
Noca_3258
N-acetyltransferase GCN5 (226 aa)
              0.575
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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