STRINGSTRING
Noca_3263 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3263" - Beta-glucosidase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3263Beta-glucosidase (678 aa)    
Predicted Functional Partners:
Noca_4617
Cellulase (341 aa)
         
  0.946
Noca_3501
Cellulase (346 aa)
         
  0.946
Noca_0056
Glycosyl hydrolase family 32 protein (415 aa)
 
   
  0.921
Noca_0775
Alpha amylase (534 aa)
       
  0.911
Noca_3917
Beta-glucosidase (455 aa)
 
   
  0.871
Noca_4587
Beta-glucosidase (465 aa)
 
   
  0.870
Noca_2708
Beta-lactamase (417 aa)
       
  0.692
Noca_3262
Amidohydrolase (361 aa)
              0.664
Noca_3264
ROK family protein (387 aa)
         
  0.651
Noca_0954
Glycoside hydrolase family protein (831 aa)
 
   
  0.640
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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