STRINGSTRING
Noca_3286 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3286" - Dak phosphatase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3286Dak phosphatase (552 aa)    
Predicted Functional Partners:
Noca_1885
degV family protein (284 aa)
        0.944
Noca_3285
ATP-dependent DNA helicase RecG (750 aa)
 
   
  0.904
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (159 aa)
 
          0.884
Noca_3284
Putative methyltransferase (198 aa)
              0.870
Noca_3282
Hypothetical protein (192 aa)
              0.764
rpmB
50S ribosomal protein L28 (61 aa)
              0.725
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (276 aa)
              0.632
fpg
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3’- and 5’-phosphates (295 aa)
         
  0.489
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning (1188 aa)
 
          0.476
Noca_0488
Hypothetical protein (384 aa)
   
          0.416
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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