STRINGSTRING
Noca_3289 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3289" - AsnC family transcriptional regulator in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3289AsnC family transcriptional regulator (78 aa)    
Predicted Functional Partners:
Noca_3290
Hypothetical protein (174 aa)
 
          0.859
thiL
Thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 (316 aa)
              0.757
Noca_0486
NAD-dependent epimerase/dehydratase (359 aa)
   
          0.540
Noca_2368
Sporulation and cell division protein SsgA (118 aa)
   
          0.484
Noca_4201
Helix-turn-helix domain-containing protein (128 aa)
   
          0.476
Noca_2565
ABC transporter-like protein (627 aa)
   
          0.473
Noca_3967
Carbon monoxide dehydrogenase subunit G (246 aa)
   
          0.463
Noca_3126
Hypothetical protein (425 aa)
   
          0.455
Noca_1716
Anti-sigma factor (143 aa)
   
          0.423
Noca_0329
Anion-transporting ATPase (342 aa)
   
          0.422
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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