STRINGSTRING
Noca_3295 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3295" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3295Hypothetical protein (211 aa)    
Predicted Functional Partners:
Noca_1410
LPPG-FO 2-phospho-L-lactate transferase (337 aa)
 
   
  0.992
Noca_0815
Hypothetical protein (205 aa)
   
   
 
0.842
Noca_0865
Hypothetical protein (210 aa)
   
   
 
0.840
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (335 aa)
   
   
  0.768
Noca_3294
Phospholipid/glycerol acyltransferase (267 aa)
              0.761
Noca_3519
Hypothetical protein (135 aa)
   
          0.708
Noca_2528
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions (330 aa)
       
  0.703
Noca_1409
F420-dependent oxidoreductase (321 aa)
 
     
  0.702
Noca_2494
Hypothetical protein (115 aa)
   
          0.684
Noca_3619
FO synthase (841 aa)
 
     
  0.642
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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