STRINGSTRING
Noca_3310 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3310" - Regulatory protein LuxR in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3310Regulatory protein LuxR (512 aa)    
Predicted Functional Partners:
Noca_3309
Peroxiredoxins-like protein (192 aa)
 
          0.918
Noca_2142
Hypothetical protein (352 aa)
   
          0.577
Noca_3311
Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity (369 aa)
              0.572
Noca_2804
Glyoxalase/bleomycin resistance protein/dioxygenase (133 aa)
   
          0.555
Noca_0588
Sugar ABC transporter periplasmic component-like protein (390 aa)
   
          0.537
Noca_1137
Diguanylate cyclase (721 aa)
 
  0.534
Noca_1139
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase (883 aa)
 
  0.527
Noca_2592
Hypothetical protein (140 aa)
   
          0.518
Noca_3308
Type 11 methyltransferase (239 aa)
              0.511
Noca_4018
ABC-type branched-chain amino acid transport systems periplasmic component-like (481 aa)
   
          0.506
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (5%) [HD]