Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_3312Leucyl aminopeptidase (aminopeptidase T)-like protein; KEGG: rxy:Rxyl_1168 peptidase M29, aminopeptidase II. (371 aa)    
Predicted Functional Partners:
Noca_3314
PFAM: photosystem I assembly BtpA; KEGG: mmc:Mmcs_2423 photosystem I assembly BtpA.
       0.788
Noca_3313
PFAM: carbohydrate kinase, FGGY; KEGG: rde:RD1_3760 xylulose kinase, putative; Belongs to the FGGY kinase family.
       0.779
Noca_3315
Dihydroxyacetone kinase DhaL subunit; PFAM: Dak phosphatase; KEGG: tfu:Tfu_1716 glycerone kinase.
       0.574
Noca_3316
Dihydroxyacetone kinase DhaK subunit; PFAM: Dak kinase; KEGG: tfu:Tfu_1716 glycerone kinase.
       0.574
Noca_3317
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_81 putative permease component of transport system, probably ribose specific; TC 3.A.1.2.-.
       0.567
Noca_3318
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_83 putative permease component of transport system, probably ribose specific; TC 3.A.1.2.-.
       0.567
Noca_3319
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_85 ABC transporter ATP binding protein; TC 3.A.1.2.-.
       0.567
Noca_3320
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: bxe:Bxe_C1270 ABC sugar transporter, periplasmic ligand binding protein; TC 3.A.1.2.-.
       0.429
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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