STRINGSTRING
Noca_3313 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3313" - Carbohydrate kinase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3313Carbohydrate kinase (503 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase (387 aa)
 
 
  0.987
Noca_0381
L-ribulose-5-phosphate 4-epimerase (238 aa)
     
  0.969
Noca_3312
Leucyl aminopeptidase (371 aa)
          0.947
Noca_3314
Photosystem I assembly BtpA (268 aa)
 
        0.940
Noca_2446
Ribulose-phosphate 3-epimerase (220 aa)
   
  0.928
Noca_4592
FAD dependent oxidoreductase (523 aa)
 
 
  0.871
Noca_3637
FAD dependent oxidoreductase (584 aa)
 
 
  0.862
Noca_3397
Xylulokinase (465 aa)
 
   
0.860
Noca_1655
Carbohydrate kinase (549 aa)
   
   
 
0.855
Noca_0108
Alcohol dehydrogenase (338 aa)
 
 
  0.810
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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