STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3323PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: gvi:glr1554 probable serine proteinase; Belongs to the peptidase S8 family. (339 aa)    
Predicted Functional Partners:
Noca_0303
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: sco:SCO5734 ATP/GTP binding protein (membrane protein).
  
 
 0.790
Noca_0309
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mmc:Mmcs_0380 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.685
Noca_0998
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ade:Adeh_0468 cation transporting P-type ATPase.
  
 0.618
Noca_3322
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pto:PTO1249 alcohol dehydrogenase.
   
 
 0.580
Noca_3324
KEGG: sus:Acid_1047 conserved hypothetical cytosolic protein.
       0.475
Noca_2305
KEGG: mmc:Mmcs_3312 hypothetical protein.
  
 0.450
Noca_0308
KEGG: fal:FRAAL2961 hypothetical protein.
  
 
 0.442
Noca_3433
KEGG: xac:XAC3546 outer membrane protein.
  
 
 0.418
Noca_2056
PFAM: cation efflux protein; KEGG: cgb:cg2271 Co/Zn/Cd efflux system component.
  
 0.402
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.401
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.