STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3324KEGG: sus:Acid_1047 conserved hypothetical cytosolic protein. (101 aa)    
Predicted Functional Partners:
Noca_2495
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
      
 0.640
Noca_2496
Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
      
 0.640
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
      
 0.640
Noca_3325
TIGRFAM: prevent-host-death family protein; KEGG: fra:Francci3_0142 prevent-host-death protein.
       0.565
Noca_3326
PFAM: PilT protein domain protein; KEGG: fra:Francci3_0141 PilT protein-like.
       0.562
Noca_3323
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: gvi:glr1554 probable serine proteinase; Belongs to the peptidase S8 family.
       0.475
Noca_3327
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_1758 alcohol dehydrogenase, zinc-binding protein.
       0.403
Noca_0009
PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: cef:CE1215 hypothetical protein.
 
     0.401
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.