STRINGSTRING
Noca_3333 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3333" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3333Hypothetical protein (182 aa)    
Predicted Functional Partners:
Noca_3334
Hypothetical protein (67 aa)
              0.859
Noca_3332
Hypothetical protein (187 aa)
              0.824
Noca_3331
Helix-turn-helix domain-containing protein (166 aa)
              0.824
Noca_0278
Glyoxalase/bleomycin resistance protein/dioxygenase (130 aa)
   
          0.626
Noca_3330
Hypothetical protein (649 aa)
              0.527
Noca_3635
Hypothetical protein (373 aa)
   
          0.496
Noca_2680
Plasmid stabilization system protein (98 aa)
   
          0.495
Noca_3497
Glycosyl transferase family protein (496 aa)
   
          0.486
Noca_0589
Hypothetical protein (408 aa)
   
          0.456
Noca_1100
Phage integrase family protein (383 aa)
   
          0.433
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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