STRINGSTRING
Noca_3350 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3350" - ABC transporter-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3350ABC transporter-like protein (230 aa)    
Predicted Functional Partners:
Noca_3351
Cobalt transport protein (204 aa)
 
  0.999
Noca_3349
BioY protein (207 aa)
 
   
  0.995
Noca_1329
Cobalt ABC transporter, inner membrane subunit CbiQ (222 aa)
  0.923
Noca_3431
Cobalt transport protein (374 aa)
   
  0.903
Noca_3348
TetR family transcriptional regulator (185 aa)
 
          0.799
Noca_1327
Cobalamin (vitamin B12) biosynthesis protein CbiM (229 aa)
 
   
  0.773
Noca_3409
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (526 aa)
   
   
  0.737
Noca_2892
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (507 aa)
   
   
  0.737
Noca_2890
precorrin-6Y C5,15-methyltransferase (398 aa)
   
   
  0.686
cysA
Sulfate ABC transporter ATPase; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system (339 aa)
 
 
0.565
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (10%) [HD]