STRINGSTRING
Noca_3353 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3353" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3353Hypothetical protein (146 aa)    
Predicted Functional Partners:
Noca_3352
Putative transcriptional regulator (228 aa)
 
        0.918
Noca_3355
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (392 aa)
 
          0.878
Noca_3354
GTP cyclohydrolase (219 aa)
              0.869
Noca_3309
Peroxiredoxins-like protein (192 aa)
   
          0.620
Noca_3979
C4-dicarboxylate transporter/malic acid transport protein (352 aa)
   
          0.559
Noca_2142
Hypothetical protein (352 aa)
   
          0.547
Noca_2804
Glyoxalase/bleomycin resistance protein/dioxygenase (133 aa)
   
          0.538
Noca_1344
Transcriptional regulator (229 aa)
 
        0.530
Noca_4467
Putative hydrogenase HycP (220 aa)
   
          0.477
Noca_2592
Hypothetical protein (140 aa)
   
          0.449
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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