STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3357PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_0265 GCN5-related N-acetyltransferase. (173 aa)    
Predicted Functional Partners:
Noca_3358
PFAM: Amidase; KEGG: tfu:Tfu_2207 amidase; Belongs to the amidase family.
       0.773
Noca_3356
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fal:FRAAL2466 putative short chain dehydrogenase.
       0.741
Noca_0092
TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: tfu:Tfu_1968 allophanate hydrolase subunit 2.
  
  
 0.726
Noca_2976
TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: sma:SAV6937 antagonist of KipI.
  
  
 0.726
Noca_4152
KEGG: mpa:MAP2481c hypothetical protein.
  
     0.662
Noca_3359
PFAM: NADPH-dependent FMN reductase; KEGG: sma:SAV7045 reductase.
       0.649
Noca_2977
PFAM: Allophanate hydrolase subunit 1; KEGG: sma:SAV6938 inhibitor of KinA.
  
  
 0.600
Noca_4010
KEGG: mmc:Mmcs_1152 hypothetical protein.
  
     0.538
Noca_3360
PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro06435 possible transcriptional regulator, TetR family.
       0.462
Noca_2374
KEGG: rha:RHA1_ro07061 hypothetical protein.
 
     0.418
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.