STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3369KEGG: dra:DR0603 cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domains protein. (188 aa)    
Predicted Functional Partners:
Noca_0299
KEGG: pac:PPA2178 hypothetical protein.
  
     0.749
Noca_0449
KEGG: sco:SCO3402 secreted protein.
  
     0.735
Noca_4682
KEGG: sco:SCO3895 hypothetical protein.
  
     0.723
Noca_3103
PFAM: flavin reductase domain protein, FMN-binding; KEGG: rpb:RPB_1003 flavin reductase-like, FMN-binding.
  
     0.717
Noca_4674
PFAM: alanine racemase domain protein; KEGG: sco:SCO3903 hypothetical protein.
  
     0.711
Noca_4673
PFAM: Methicillin resistance protein; KEGG: sco:SCO3593 hypothetical protein.
 
     0.692
Noca_1714
KEGG: mpa:MAP3318c hypothetical protein.
  
     0.679
Noca_3586
Hypothetical protein; KEGG: sma:SAV3318 putative RNA polymerase ECF-subfamily sigma factor.
 
     0.675
Noca_0153
KEGG: pac:PPA2088 hypothetical protein.
  
     0.667
Noca_0254
PFAM: amino acid-binding ACT domain protein; KEGG: pac:PPA1121 hypothetical protein.
 
     0.655
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.