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Noca_3373 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3373" - GntR family transcriptional regulator in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3373GntR family transcriptional regulator (478 aa)    
Predicted Functional Partners:
Noca_3372
Hypothetical protein (228 aa)
 
          0.944
Noca_3645
Inosine-5’-monophosphate dehydrogenase (500 aa)
   
 
    0.693
Noca_2608
Inosine 5-monophosphate dehydrogenase (478 aa)
   
 
    0.693
Noca_3371
Hypothetical protein (161 aa)
              0.644
Noca_3693
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein (528 aa)
   
 
    0.551
Noca_3370
Type 12 methyltransferase (200 aa)
              0.550
Noca_3367
Branched chain amino acid aminotransferase (357 aa)
   
 
  0.547
Noca_2367
Class IV aminotransferase (274 aa)
   
 
  0.547
Noca_3946
Hypothetical protein (175 aa)
   
          0.540
Noca_4077
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein (491 aa)
   
 
    0.537
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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