Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Noca_3382Agmatinase; TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mmc:Mmcs_5283 agmatinase, putative; Belongs to the arginase family. (321 aa)    
Predicted Functional Partners:
Noca_3529
PFAM: aldehyde dehydrogenase; KEGG: sco:SCO4913 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.928
Noca_3634
PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP2338 hypothetical protein.
  
 0.928
Noca_1780
D-amino-acid:oxygen oxidoreductase (deaminating); PFAM: FAD dependent oxidoreductase; KEGG: rxy:Rxyl_0526 D-amino acid oxidase.
 
 
 0.922
Noca_1837
PFAM: FAD dependent oxidoreductase; KEGG: pfo:Pfl_0969 FAD dependent oxidoreductase.
  
 
 0.912
Noca_0666
PFAM: Amidase; KEGG: mmc:Mmcs_1995 amidase.
    
 0.904
Noca_1228
PFAM: Amidase; KEGG: mpa:MAP2509c putative amidase; Belongs to the amidase family.
    
 0.904
Noca_1493
PFAM: Amidase; KEGG: rha:RHA1_ro04799 probable amidase; Belongs to the amidase family.
    
 0.904
Noca_3358
PFAM: Amidase; KEGG: tfu:Tfu_2207 amidase; Belongs to the amidase family.
    
 0.904
Noca_1658
Glutamate dehydrogenase (NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: nfa:nfa45920 putative glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.878
Noca_3205
TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: rha:RHA1_ro05598 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.859
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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