STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3395KEGG: rha:RHA1_ro04002 hypothetical protein. (115 aa)    
Predicted Functional Partners:
Noca_3393
PFAM: transcriptional coactivator/pterin dehydratase; KEGG: cef:CE0476 putative pterin-4-alpha-carbinolamine dehydratase.
 
    0.650
Noca_1866
KEGG: rha:RHA1_ro04434 hypothetical protein.
 
   
 0.577
Noca_3394
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_0156 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.566
Noca_0963
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sma:SAV785 hypothetical protein.
 
     0.481
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.455
Noca_0278
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lxx:Lxx15560 lyase.
 
     0.434
Noca_3101
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.