STRINGSTRING
Noca_3397 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3397" - Xylulokinase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3397Xylulokinase (465 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase (387 aa)
 
 
  0.993
Noca_0381
L-ribulose-5-phosphate 4-epimerase (238 aa)
 
   
  0.974
Noca_0476
Xylose isomerase domain-containing protein (262 aa)
       
    0.963
Noca_2541
Transketolase (714 aa)
   
 
  0.955
Noca_4222
Transketolase (270 aa)
         
    0.944
Noca_4221
Transketolase subunit B (307 aa)
         
    0.943
Noca_2446
Ribulose-phosphate 3-epimerase (220 aa)
     
  0.924
Noca_3396
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively (401 aa)
              0.865
Noca_3313
Carbohydrate kinase (503 aa)
 
   
0.860
Noca_1655
Carbohydrate kinase (549 aa)
 
   
0.859
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]