STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3418Hypothetical protein. (138 aa)    
Predicted Functional Partners:
Noca_1442
Hypothetical protein; KEGG: fra:Francci3_1730 response regulator receiver and SARP domain protein.
  
   0.912
Noca_2229
PFAM: Peptidoglycan-binding LysM; KEGG: sco:SCP1.176 putative large membrane protein.
  
   0.912
Noca_1471
KEGG: sco:SCO1819 integral membrane protein.
  
  
 0.528
Noca_1872
KEGG: nfa:nfa24740 hypothetical protein.
  
  
 0.528
Noca_3994
Trehalose 6-phosphate synthase; PFAM: glycosyl transferase, family 20; KEGG: pac:PPA0961 alpha,alpha-trehalose-phosphate synthase.
   
    0.520
Noca_4518
PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: tfu:Tfu_2340 hypothetical protein.
   
    0.517
Noca_1377
PFAM: OsmC family protein; KEGG: sma:SAV1862 putative ATP/GTP-binding protein.
   
    0.468
Noca_2104
PFAM: OsmC family protein; KEGG: rxy:Rxyl_0142 OsmC-like protein.
   
    0.468
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.