STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3427PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_1736 alpha/beta hydrolase fold-1. (304 aa)    
Predicted Functional Partners:
Noca_3428
PFAM: NHL repeat containing protein; glucose sorbosone dehydrogenase; KEGG: rha:RHA1_ro02468 possible glucose dehydrogenase.
       0.781
Noca_3426
Hypothetical protein.
       0.623
Noca_1064
PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_1656 alpha/beta hydrolase fold.
  
     0.600
Noca_3990
Hypothetical protein; KEGG: rha:RHA1_ro02174 possible glycoprotein.
 
     0.528
Noca_0436
KEGG: pca:Pcar_1759 hypothetical protein.
  
     0.488
Noca_3688
PFAM: extracellular solute-binding protein, family 1; KEGG: bcl:ABC3585 sugar ABC transporter substrate-binding protein; TC 3.A.1.1.-.
  
     0.483
Noca_2791
PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa15720 putative hydrolase.
  
     0.475
Noca_1922
Hypothetical protein.
  
     0.471
Noca_3425
PFAM: protein of unknown function DUF6, transmembrane; KEGG: tfu:Tfu_1994 putative integral membrane protein.
       0.437
Noca_0173
PFAM: phosphoesterase, PA-phosphatase related; diacylglycerol kinase, catalytic region; KEGG: lxx:Lxx21980 hypothetical protein.
 
 
 
 0.434
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.