STRINGSTRING
Noca_3428 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3428" - Glucose sorbosone dehydrogenase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3428Glucose sorbosone dehydrogenase (389 aa)    
Predicted Functional Partners:
Noca_3427
Alpha/beta hydrolase fold protein (304 aa)
              0.861
Noca_3426
Hypothetical protein (73 aa)
              0.700
Noca_2930
Beta-lactamase domain-containing protein (378 aa)
 
   
    0.563
Noca_2522
Beta-lactamase domain-containing protein (230 aa)
 
   
    0.537
Noca_3425
Hypothetical protein (292 aa)
              0.480
Noca_3650
Beta-lactamase domain-containing protein (207 aa)
       
    0.469
Noca_2937
Beta-lactamase domain-containing protein (452 aa)
       
    0.469
Noca_1902
Beta-lactamase domain-containing protein (287 aa)
       
    0.469
Noca_0428
Beta-lactamase domain-containing protein (366 aa)
       
    0.469
Noca_0338
Beta-lactamase domain-containing protein (255 aa)
       
    0.469
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (12%) [HD]