STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3460Hypothetical protein. (66 aa)    
Predicted Functional Partners:
Noca_3461
TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: fal:FRAAL1920 rod shape-determining membrane protein; cell elongation; Belongs to the SEDS family.
       0.678
Noca_3462
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: sma:SAV5458 penicillin-binding protein.
       0.678
Noca_3463
KEGG: sco:SCO2609 rod shape-determining protein.
       0.647
Noca_3464
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
       0.647
Noca_3465
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: fra:Francci3_1211 cell shape determining protein, MreB/Mrl family.
       0.647
Noca_3459
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sma:SAV5461 hypothetical protein.
       0.547
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.