Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3464Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (302 aa)    
Predicted Functional Partners:
Noca_3465
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: fra:Francci3_1211 cell shape determining protein, MreB/Mrl family.
 
 
 0.995
Noca_3463
KEGG: sco:SCO2609 rod shape-determining protein.
 
 
 0.994
Noca_3462
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: sma:SAV5458 penicillin-binding protein.
 
 
 0.978
Noca_3461
TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: fal:FRAAL1920 rod shape-determining membrane protein; cell elongation; Belongs to the SEDS family.
 
  
 0.933
Noca_3504
Maf protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.699
Noca_3069
Peptidoglycan synthetase FtsI; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: sco:SCO2090 cell division protein.
 
 
 0.674
Noca_0171
KEGG: sth:STH3328 hypothetical protein.
 
  
 0.654
Noca_3460
Hypothetical protein.
       0.647
Noca_2318
KEGG: sma:SAV2509 hypothetical protein.
 
 
 
 0.642
Noca_0024
Cell elongation-specific peptidoglycan D,D-transpeptidase; PFAM: penicillin-binding protein, transpeptidase; KEGG: fal:FRAAL6753 putative penicillin-binding protein PbpA.
 
 
 0.638
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.