STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3469KEGG: sma:SAV5453 hypothetical protein. (126 aa)    
Predicted Functional Partners:
Noca_3470
TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: sma:SAV5452 putative folylpolyglutamate synthase.
  
  
 0.924
Noca_2458
KEGG: sco:SCO1602 hypothetical protein.
  
   
 0.748
Noca_2946
KEGG: sco:SCO5843 hypothetical protein.
  
     0.716
Noca_2457
KEGG: tfu:Tfu_1823 hypothetical protein.
  
     0.659
Noca_4682
KEGG: sco:SCO3895 hypothetical protein.
  
     0.654
Noca_3463
KEGG: sco:SCO2609 rod shape-determining protein.
 
     0.648
Noca_2621
KEGG: sma:SAV6637 hypothetical protein.
  
     0.647
Noca_1413
KEGG: tfu:Tfu_2513 hypothetical protein.
  
     0.623
Noca_4674
PFAM: alanine racemase domain protein; KEGG: sco:SCO3903 hypothetical protein.
  
     0.622
Noca_1787
KEGG: tfu:Tfu_2558 hypothetical protein.
  
     0.608
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.