STRINGSTRING
Noca_3469 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3469" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3469Hypothetical protein (126 aa)    
Predicted Functional Partners:
Noca_3470
Bifunctional folylpolyglutamate synthase/ dihydrofolate synthase (460 aa)
              0.878
Noca_2296
RDD domain-containing protein (150 aa)
   
          0.730
Noca_2946
Hypothetical protein (198 aa)
   
          0.700
Noca_1468
ErfK/YbiS/YcfS/YnhG family protein (234 aa)
   
          0.684
Noca_1787
Hypothetical protein (255 aa)
   
          0.663
Noca_0795
Hypothetical protein (272 aa)
   
          0.662
Noca_3481
Stage II sporulation E family protein (367 aa)
   
          0.657
Noca_4682
Hypothetical protein (735 aa)
   
          0.656
Noca_0153
Hypothetical protein (234 aa)
   
          0.654
Noca_3471
Alcohol dehydrogenase (370 aa)
              0.651
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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