STRINGSTRING
Noca_3479 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3479" - PGAP1 family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3479PGAP1 family protein (378 aa)    
Predicted Functional Partners:
Noca_3478
Cyclase/dehydrase (160 aa)
              0.859
Noca_2917
Short chain dehydrogenase (665 aa)
   
          0.763
Noca_3706
Diacylglycerol O-acyltransferase (472 aa)
 
          0.746
Noca_1232
Short-chain dehydrogenase/reductase SDR (305 aa)
   
          0.746
Noca_1669
Diacylglycerol O-acyltransferase (490 aa)
 
          0.729
Noca_2792
Diacylglycerol O-acyltransferase (488 aa)
 
          0.720
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase (471 aa)
              0.691
Noca_3509
Hypothetical protein (407 aa)
   
          0.623
Noca_1396
Diacylglycerol O-acyltransferase (458 aa)
 
          0.621
Noca_3477
ClpP1 peptidase; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (195 aa)
              0.573
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (6%) [HD]