STRINGSTRING
Noca_3493 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3493" - Membrane-flanked domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3493Membrane-flanked domain-containing protein (166 aa)    
Predicted Functional Partners:
Noca_3492
Adenylate cyclase (335 aa)
              0.859
Noca_3494
biotin--acetyl-CoA-carboxylase ligase (263 aa)
              0.829
Noca_1380
Hypothetical protein (129 aa)
   
          0.734
Noca_4691
D-alanine--D-alanine ligase; Cell wall formation (323 aa)
   
          0.683
Noca_3930
Hypothetical protein (264 aa)
   
          0.676
Noca_1896
Putative DNA-directed DNA polymerase (520 aa)
   
          0.630
Noca_3495
Carboxyl transferase (540 aa)
              0.626
Noca_3610
YbaK/prolyl-tRNA synthetase associated domain-containing protein (180 aa)
   
          0.601
Noca_3491
Transcriptional regulator domain-containing protein (142 aa)
              0.571
Noca_4231
Hypothetical protein (161 aa)
   
          0.556
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (6%) [HD]