STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3502TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06636 multidrug resistance transporter, MFS superfamily. (474 aa)    
Predicted Functional Partners:
Noca_3503
PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro06635 transcriptional regulator, TetR family.
 
  
 0.747
Noca_3501
Cellulase; PFAM: glycoside hydrolase, family 6; KEGG: mtc:MT0067 cellulase; Belongs to the glycosyl hydrolase family 6.
       0.705
Noca_3504
Maf protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
     
 0.574
Noca_3500
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cjk:jk1635 response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.505
Noca_2175
Hypothetical protein; KEGG: fal:FRAAL0176 putative membrane transport protein.
  
     0.446
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.