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Noca_3502 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3502" - EmrB/QacA family drug resistance transporter in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3502EmrB/QacA family drug resistance transporter (474 aa)    
Predicted Functional Partners:
Noca_3503
TetR family transcriptional regulator (200 aa)
 
          0.868
Noca_3501
Cellulase (346 aa)
              0.779
Noca_4275
Major facilitator transporter (470 aa)
   
          0.778
Noca_4080
Major facilitator transporter (461 aa)
   
          0.778
Noca_2951
Major facilitator transporter (584 aa)
   
          0.772
Noca_3504
Maf protein (203 aa)
              0.657
Noca_3500
Response regulator receiver (356 aa)
         
  0.564
Noca_1482
Daunorubicin resistance ABC transporter ATPase subunit (344 aa)
 
     
  0.469
Noca_0478
ABC transporter-like protein (249 aa)
 
     
  0.469
Noca_4170
MarR family transcriptional regulator (147 aa)
         
  0.442
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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