Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Noca_3511 | Noca_3512 | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05943 hypothetical protein. | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05942 hypothetical protein. | 0.984 |
Noca_3511 | Noca_3513 | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05943 hypothetical protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.574 |
Noca_3511 | Noca_3514 | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05943 hypothetical protein. | TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: rha:RHA1_ro01572 benzoate membrane transport protein BenE. | 0.425 |
Noca_3512 | Noca_3511 | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05942 hypothetical protein. | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05943 hypothetical protein. | 0.984 |
Noca_3512 | Noca_3513 | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05942 hypothetical protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.574 |
Noca_3512 | Noca_3514 | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05942 hypothetical protein. | TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: rha:RHA1_ro01572 benzoate membrane transport protein BenE. | 0.425 |
Noca_3513 | Noca_3511 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05943 hypothetical protein. | 0.574 |
Noca_3513 | Noca_3512 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05942 hypothetical protein. | 0.574 |
Noca_3513 | Noca_3514 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: rha:RHA1_ro01572 benzoate membrane transport protein BenE. | 0.558 |
Noca_3514 | Noca_3511 | TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: rha:RHA1_ro01572 benzoate membrane transport protein BenE. | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05943 hypothetical protein. | 0.425 |
Noca_3514 | Noca_3512 | TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: rha:RHA1_ro01572 benzoate membrane transport protein BenE. | PFAM: membrane-flanked domain; KEGG: rha:RHA1_ro05942 hypothetical protein. | 0.425 |
Noca_3514 | Noca_3513 | TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: rha:RHA1_ro01572 benzoate membrane transport protein BenE. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.558 |