STRINGSTRING
Noca_3514 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3514" - Benzoate transporter in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3514Benzoate transporter (361 aa)    
Predicted Functional Partners:
Noca_3513
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second (1128 aa)
              0.628
Noca_0073
Helix-turn-helix domain-containing protein (210 aa)
 
        0.527
Noca_4224
Hypothetical protein (566 aa)
   
          0.518
Noca_3512
Membrane-flanked domain-containing protein (491 aa)
              0.484
Noca_3511
Membrane-flanked domain-containing protein (165 aa)
              0.484
Noca_3510
Carbamoyl-phosphate synthase subunit L (590 aa)
              0.445
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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