STRINGSTRING
Noca_3515 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3515" - SpoIID/LytB domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3515SpoIID/LytB domain-containing protein (417 aa)    
Predicted Functional Partners:
Noca_3516
SpoIID/LytB domain-containing protein (384 aa)
 
       
0.762
Noca_3517
Flavoprotein disulfide reductase (465 aa)
         
  0.611
Noca_3518
Dihydrolipoamide dehydrogenase (464 aa)
         
  0.595
secD
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (564 aa)
 
          0.494
Noca_1307
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP (439 aa)
       
    0.461
Noca_4255
Hypothetical protein (320 aa)
   
          0.461
Noca_3519
Hypothetical protein (135 aa)
              0.452
Noca_2696
Hypothetical protein (581 aa)
   
          0.443
Noca_1270
Peptidase M23B (419 aa)
 
     
  0.438
Noca_3170
Hypothetical protein (183 aa)
   
          0.432
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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