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Noca_3516 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3516" - SpoIID/LytB domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3516SpoIID/LytB domain-containing protein (384 aa)    
Predicted Functional Partners:
Noca_3515
SpoIID/LytB domain-containing protein (417 aa)
 
       
0.762
Noca_3517
Flavoprotein disulfide reductase (465 aa)
         
  0.731
Noca_3518
Dihydrolipoamide dehydrogenase (464 aa)
         
  0.712
Noca_3519
Hypothetical protein (135 aa)
              0.532
Noca_2696
Hypothetical protein (581 aa)
   
          0.504
secD
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (564 aa)
 
          0.502
Noca_4255
Hypothetical protein (320 aa)
   
          0.497
ruvC
Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (177 aa)
 
          0.477
Noca_1307
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP (439 aa)
       
    0.461
Noca_1270
Peptidase M23B (419 aa)
 
     
  0.454
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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