STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3532Hypothetical protein. (182 aa)    
Predicted Functional Partners:
Noca_3531
Uridine kinase; KEGG: sma:SAV3350 ATP-binding protein.
       0.785
Noca_3530
PFAM: aldehyde dehydrogenase; KEGG: sma:SAV3348 aldehyde dehydrogenase.
       0.773
Noca_3528
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
       0.615
Noca_3529
PFAM: aldehyde dehydrogenase; KEGG: sco:SCO4913 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.581
Noca_3649
KEGG: cdi:DIP1163 hypothetical protein.
  
     0.471
Noca_1964
KEGG: sco:SCO0559 hypothetical protein.
  
     0.458
Noca_4606
PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO4151 acetyltransferase.
  
     0.438
Noca_3527
Hypothetical protein.
       0.436
Noca_3196
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fra:Francci3_1747 HAD-superfamily hydrolase, subfamily IA, variant 1.
  
     0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.