STRINGSTRING
Noca_3542 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3542" - Amidohydrolase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3542Amidohydrolase (406 aa)    
Predicted Functional Partners:
Noca_3541
Basic membrane lipoprotein (354 aa)
              0.709
Noca_3543
LAO/AO transport system ATPase (328 aa)
              0.700
Noca_3544
methylmalonyl-CoA mutase (720 aa)
              0.700
Noca_3545
methylmalonyl-CoA mutase (569 aa)
              0.690
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (279 aa)
   
 
  0.674
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (247 aa)
 
        0.536
Noca_3546
Hypothetical protein (247 aa)
              0.516
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA (320 aa)
   
   
  0.481
Noca_3537
Cytidine deaminase (133 aa)
              0.477
Noca_3702
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity (376 aa)
          0.476
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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