STRINGSTRING
Noca_3545 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3545" - methylmalonyl-CoA mutase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3545methylmalonyl-CoA mutase (569 aa)    
Predicted Functional Partners:
Noca_3543
LAO/AO transport system ATPase (328 aa)
 
  0.993
Noca_1796
methylmalonyl-CoA epimerase (170 aa)
 
 
  0.991
Noca_3544
methylmalonyl-CoA mutase (720 aa)
 
0.988
Noca_4143
methylmalonyl-CoA mutase large subunit (1043 aa)
 
  0.987
Noca_1772
methylmalonyl-CoA mutase (680 aa)
 
 
  0.960
Noca_2128
Cobalamin B12-binding domain-containing protein (172 aa)
 
  0.945
Noca_3589
succinyl-CoA synthetase subunit alpha (297 aa)
   
 
  0.929
sucC
succinyl-CoA synthetase subunit beta (386 aa)
   
 
  0.927
Noca_2131
methylmalonyl-CoA mutase (569 aa)
 
0.920
Noca_1802
methylmalonyl-CoA mutase (562 aa)
 
0.918
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (11%) [HD]