STRINGSTRING
Noca_1592 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1592" - Integrase catalytic subunit in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1592Integrase catalytic subunit (250 aa)    
Predicted Functional Partners:
Noca_3564
Transposase IS3/IS911 family protein (103 aa)
 
   
  0.765
Noca_0063
Transposase IS3/IS911 family protein (109 aa)
 
   
  0.633
Noca_2032
Transposase IS3/IS911 family protein (106 aa)
 
   
  0.563
Noca_1591
Transposase IS3/IS911 family protein (103 aa)
 
   
  0.561
Noca_1092
Transposase IS3/IS911 family protein (103 aa)
 
   
  0.561
Noca_0571
Transposase IS3/IS911 family protein (103 aa)
 
   
  0.561
Noca_2153
Transposase IS3/IS911 family protein (127 aa)
   
   
  0.493
groL2
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (541 aa)
     
 
  0.436
groL1
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (541 aa)
     
 
  0.436
Noca_4263
Phosphate ABC transporter, periplasmic phosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import (370 aa)
     
 
  0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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