STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3595PFAM: response regulator receiver; KEGG: gme:Gmet_3119 response regulator receiver domain protein (CheY-like). (120 aa)    
Predicted Functional Partners:
Noca_3596
KEGG: aba:Acid345_1530 hypothetical protein.
 
 
 0.993
Noca_3604
PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: aba:Acid345_1524 CheA signal transduction histidine kinases.
 
 0.993
Noca_3603
PFAM: CheW domain protein; KEGG: aba:Acid345_1525 CheW protein.
 
 0.992
Noca_3602
Chemotaxis sensory transducer; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer.
 
 0.987
Noca_1293
Chemotaxis sensory transducer; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer.
 
 0.981
Noca_2984
Chemotaxis sensory transducer; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer.
 
 0.981
Noca_1974
Chemotaxis sensory transducer; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: aba:Acid345_1526 methyl-accepting chemotaxis sensory transducer.
 
 0.980
Noca_3594
Hypothetical protein.
     0.977
Noca_3597
PFAM: response regulator receiver; KEGG: aba:Acid345_1527 response regulator receiver protein, CheY.
 
0.975
Noca_0745
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: tma:TM0680a chemotaxis protein.
 
 0.954
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.