STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3600Hypothetical protein. (301 aa)    
Predicted Functional Partners:
Noca_3601
KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer.
       0.636
Noca_3596
KEGG: aba:Acid345_1530 hypothetical protein.
       0.634
Noca_3598
PFAM: MCP methyltransferase, CheR-type; Methyltransferase type 12; KEGG: aba:Acid345_1529 MCP methyltransferase, CheR-type.
       0.617
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
       0.614
Noca_3602
Chemotaxis sensory transducer; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer.
       0.574
Noca_3603
PFAM: CheW domain protein; KEGG: aba:Acid345_1525 CheW protein.
       0.566
Noca_3595
PFAM: response regulator receiver; KEGG: gme:Gmet_3119 response regulator receiver domain protein (CheY-like).
       0.561
Noca_3594
Hypothetical protein.
       0.560
Noca_3604
PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: aba:Acid345_1524 CheA signal transduction histidine kinases.
       0.548
Noca_3597
PFAM: response regulator receiver; KEGG: aba:Acid345_1527 response regulator receiver protein, CheY.
       0.532
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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